how about the following mwe:
import dolfinx
from mpi4py import MPI
import numpy as np
mesh = dolfinx.mesh.create_unit_square(MPI.COMM_WORLD, 4, 4)
V_coord = dolfinx.fem.FunctionSpace(
mesh, mesh.ufl_domain().ufl_coordinate_element())
V = dolfinx.fem.VectorFunctionSpace(mesh, ("CG", 2))
u = dolfinx.fem.Function(V)
u.interpolate(lambda x: np.stack((0.1*x[1]**2, 0.1*x[0]**2)))
u_coord = dolfinx.fem.Function(V_coord)
u_coord.interpolate(u)
mesh.geometry.x[:, :mesh.geometry.dim] += u_coord.x.array.reshape(
(-1, mesh.geometry.dim))
with dolfinx.io.XDMFFile(mesh.comm, "mesh.xdmf", "w") as xdmf:
xdmf.write_mesh(mesh)
