Hi Everyone,
I am writing .h5 file for previous timestep using
wH5File = HDF5File(MPI.comm_world,"w.h5","w")
wH5File.write(w,"/w")
wH5File.close()
uH5File = HDF5File(MPI.comm_world,"uhat.h5","w")
uH5File.write(uhat,"/uhat")
uH5File.close()
But when I try to initialize it, I get following long error
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1401 in H5Adelete(): unable to delete attribute
major: Attribute
minor: Can't delete message
#001: ../../../src/H5Oattribute.c line 1541 in H5O__attr_remove(): unable to pin object header
major: Attribute
minor: Unable to pin cache entry
#002: ../../../src/H5Oint.c line 1212 in H5O_pin(): unable to protect object header
major: Object header
minor: Unable to protect metadata
#003: ../../../src/H5Oint.c line 1039 in H5O_protect(): no write intent on file
major: Object header
minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 269 in H5Acreate2(): no write intent on file
major: Invalid arguments to routine
minor: Write failed
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 625 in H5Awrite(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1541 in H5Aclose(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1401 in H5Adelete(): unable to delete attribute
major: Attribute
minor: Can't delete message
#001: ../../../src/H5Oattribute.c line 1541 in H5O__attr_remove(): unable to pin object header
major: Attribute
minor: Unable to pin cache entry
#002: ../../../src/H5Oint.c line 1212 in H5O_pin(): unable to protect object header
major: Object header
minor: Unable to protect metadata
#003: ../../../src/H5Oint.c line 1039 in H5O_protect(): no write intent on file
major: Object header
minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 269 in H5Acreate2(): no write intent on file
major: Invalid arguments to routine
minor: Write failed
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 625 in H5Awrite(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1541 in H5Aclose(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1401 in H5Adelete(): unable to delete attribute
major: Attribute
minor: Can't delete message
#001: ../../../src/H5Oattribute.c line 1541 in H5O__attr_remove(): unable to pin object header
major: Attribute
minor: Unable to pin cache entry
#002: ../../../src/H5Oint.c line 1212 in H5O_pin(): unable to protect object header
major: Object header
minor: Unable to protect metadata
#003: ../../../src/H5Oint.c line 1039 in H5O_protect(): no write intent on file
major: Object header
minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 269 in H5Acreate2(): no write intent on file
major: Invalid arguments to routine
minor: Write failed
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 625 in H5Awrite(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1541 in H5Aclose(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1401 in H5Adelete(): unable to delete attribute
major: Attribute
minor: Can't delete message
#001: ../../../src/H5Oattribute.c line 1541 in H5O__attr_remove(): unable to pin object header
major: Attribute
minor: Unable to pin cache entry
#002: ../../../src/H5Oint.c line 1212 in H5O_pin(): unable to protect object header
major: Object header
minor: Unable to protect metadata
#003: ../../../src/H5Oint.c line 1039 in H5O_protect(): no write intent on file
major: Object header
minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 269 in H5Acreate2(): no write intent on file
major: Invalid arguments to routine
minor: Write failed
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 625 in H5Awrite(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1541 in H5Aclose(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1401 in H5Adelete(): unable to delete attribute
major: Attribute
minor: Can't delete message
#001: ../../../src/H5Oattribute.c line 1541 in H5O__attr_remove(): unable to pin object header
major: Attribute
minor: Unable to pin cache entry
#002: ../../../src/H5Oint.c line 1212 in H5O_pin(): unable to protect object header
major: Object header
minor: Unable to protect metadata
#003: ../../../src/H5Oint.c line 1039 in H5O_protect(): no write intent on file
major: Object header
minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 269 in H5Acreate2(): no write intent on file
major: Invalid arguments to routine
minor: Write failed
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 625 in H5Awrite(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1541 in H5Aclose(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 152 in H5Dcreate2(): unable to create dataset
major: Dataset
minor: Unable to initialize object
#001: ../../../src/H5Dint.c line 338 in H5D__create_named(): unable to create and link to dataset
major: Dataset
minor: Unable to initialize object
#002: ../../../src/H5L.c line 1605 in H5L_link_object(): unable to create new link to object
major: Links
minor: Unable to initialize object
#003: ../../../src/H5L.c line 1846 in H5L__create_real(): can't insert link
major: Links
minor: Unable to insert object
#004: ../../../src/H5Gtraverse.c line 848 in H5G_traverse(): internal path traversal failed
major: Symbol table
minor: Object not found
#005: ../../../src/H5Gtraverse.c line 624 in H5G__traverse_real(): traversal operator failed
major: Symbol table
minor: Callback failed
#006: ../../../src/H5L.c line 1641 in H5L__link_cb(): name already exists
major: Links
minor: Object already exists
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 371 in H5Dget_space(): invalid dataset identifier
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Shyper.c line 9997 in H5Sselect_hyperslab(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5Dio.c line 313 in H5Dwrite(): dset_id is not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5D.c line 334 in H5Dclose(): not a dataset ID
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5S.c line 487 in H5Sclose(): not a dataspace
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1401 in H5Adelete(): unable to delete attribute
major: Attribute
minor: Can't delete message
#001: ../../../src/H5Oattribute.c line 1541 in H5O__attr_remove(): unable to pin object header
major: Attribute
minor: Unable to pin cache entry
#002: ../../../src/H5Oint.c line 1212 in H5O_pin(): unable to protect object header
major: Object header
minor: Unable to protect metadata
#003: ../../../src/H5Oint.c line 1039 in H5O_protect(): no write intent on file
major: Object header
minor: Bad value
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 269 in H5Acreate2(): no write intent on file
major: Invalid arguments to routine
minor: Write failed
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 625 in H5Awrite(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
HDF5-DIAG: Error detected in HDF5 (1.10.7) MPI-process 0:
#000: ../../../src/H5A.c line 1541 in H5Aclose(): not an attribute
major: Invalid arguments to routine
minor: Inappropriate type
I am not sure how to resolve it. It would be great help if someone correct me.
Thank you!