Problems with running fenics after updating

1

Hello everybody,

after updating docker I can’t run my fenicscode anymore.
I entered the command
docker run -ti quay.io/fenicsproject/stable:latest
and then I can execute the demo poisson. Unfortunately if I want to go to the shared path then shared is empty and I can’t get to the directory to run my code :(.

Can somebody please help me with this?

Thank you.

2

Your docker command does not share any directories.
To share directories you need to pass the -v argument, i.e.

docker run -ti -v $(pwd):/home/fenics/shared -w /home/fenics/shared quay.io/fenicsproject/stable:latest
3

Thank you again dokken for your reply and help.

Now I have no permissions to do anything? I am so sorry for the stupid questions.

4

You need to be more specific for me to help you here. I.e. show what error message you get and which command you are running.

5

Yes, of course. I am sorry.

% docker run -ti -v $(pwd):/home/fenics/shared -w /home/fenics/shared quay.io/fenicsproject/stable:latest
# FEniCS stable version image
Welcome to FEniCS/stable!

This image provides a full-featured and optimized build of the stable

release of FEniCS.

To help you get started this image contains a number of demo

programs. Explore the demos by entering the 'demo' directory, for

example:

cd ~/demo/python/documented/poisson

python3 demo_poisson.py

fenics@98d4a9871550:~/shared$ ls

ls: cannot open directory '.': Permission denied

fenics@98d4a9871550:~/shared$ cd MA

bash: cd: MA: Permission denied

fenics@98d4a9871550:~/shared$ cd

fenics@98d4a9871550:~$ cd demo

fenics@98d4a9871550:~/demo$ cd python

fenics@98d4a9871550:~/demo/python$ cd documented

fenics@98d4a9871550:~/demo/python/documented$ cd poisson

fenics@98d4a9871550:~/demo/python/documented/poisson$ ls

demo_poisson.py demo_poisson.py.rst **poisson_u.png**

fenics@98d4a9871550:~/demo/python/documented/poisson$ python3 demo_poisson.py

Calling FFC just-in-time (JIT) compiler, this may take some time.

Calling FFC just-in-time (JIT) compiler, this may take some time.

Calling FFC just-in-time (JIT) compiler, this may take some time.

Calling FFC just-in-time (JIT) compiler, this may take some time.

Calling FFC just-in-time (JIT) compiler, this may take some time.

Calling FFC just-in-time (JIT) compiler, this may take some time.

Solving linear variational problem.

To view figure, visit http://0.0.0.0:8000

Press Ctrl+C to stop WebAgg server

^CServer is stopped

fenics@98d4a9871550:~/demo/python/documented/poisson$ cd

fenics@98d4a9871550:~$ ls

WELCOME **demo** fenics.env.conf **local** **shared**

fenics@98d4a9871550:~$ cd shared

bash: cd: shared: Permission denied

fenics@98d4a9871550:~$

So as you can see I can’t do anything else then running the demo.

6

I cannot reproduce this error on my ubuntu 16.04.
However, have a look at:

and

7

Thank you. I will have a look