I posted this under the mesh category, but did not receive a response. Would like some help figuring out how to resolve the issue as I haven’t been to understand why it is happening.
I am using MacOS, with conda complex env using :
conda create -n env3-10-complex -c conda-forge python=3.10 fenics-dolfinx ‘petsc=*=complex*’ mpich
conda install -c conda-forge scipy matplotlib
pip install gmsh
pip install pyvista pyvistaqt
conda install -c conda-forge pyvista pyvistaqt
I am checking v0.10.0 to run the demo, I am able to get the right results if I comment the pyvista code, otherwise I get the following error. I recently updated my OS, could this contribute, what should I change to be able to get the mesh/pyvista graph:
[0]PETSC ERROR: ------------------------------------------------------------------------
[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range
[0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger
[0]PETSC ERROR: or see https://petsc.org/release/faq/#valgrind and https://petsc.org/release/faq/
[0]PETSC ERROR: configure using --with-debugging=yes, recompile, link, and run
[0]PETSC ERROR: to get more information on the crash.
[0]PETSC ERROR: Run with -malloc_debug to check if memory corruption is causing the crash.
Abort(59) on node 0 (rank 0 in comm 0): application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0